STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fkbp10Peptidylprolyl isomerase. (577 aa)    
Predicted Functional Partners:
RYR3
Ryanodine receptor 3.
    
 0.667
W5NAB3_LEPOC
Ryanodine receptor 1b (skeletal).
    
 0.667
W5NIQ4_LEPOC
Ryanodine receptor 2b (cardiac).
    
 0.667
ppib
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 0.629
serpinh1
Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a; Belongs to the serpin family.
   
 
 0.612
LOC102682979
SERPIN domain-containing protein; Belongs to the serpin family.
   
 
 0.612
efemp2
EGF containing fibulin extracellular matrix protein 2a.
   
 
 0.595
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
      
 0.588
aarsd1
Alanyl-tRNA synthetase domain containing 1.
   
 0.578
W5MKE7_LEPOC
Prostaglandin E synthase 3b (cytosolic).
   
 0.570
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.