STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnajc17DnaJ (Hsp40) homolog, subfamily C, member 17. (319 aa)    
Predicted Functional Partners:
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
    
 
 0.960
W5LV53_LEPOC
Uncharacterized protein.
   
    0.688
gak
Cyclin G associated kinase.
    
 
 0.620
ibtk
Inhibitor of Bruton agammaglobulinemia tyrosine kinase.
      
 0.588
pa2g4
Proliferation-associated 2G4, a.
    
  0.549
LOC102686089
Amyloid beta precursor protein binding family A member 3.
      
 0.538
W5M1L8_LEPOC
NmrA domain-containing protein.
    
  0.525
W5M6Y9_LEPOC
NmrA domain-containing protein.
    
  0.525
blvrb
Biliverdin reductase B.
    
  0.525
ndufa9
NADH:ubiquinone oxidoreductase subunit A9a.
    
  0.520
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.