STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asb7Ankyrin repeat and SOCS box containing 7. (334 aa)    
Predicted Functional Partners:
cul5
Cullin 5b; Belongs to the cullin family.
    
 0.879
asb13
Ankyrin repeat and SOCS box containing 13a, tandem duplicate 1.
  
 
0.810
asb6
Ankyrin repeat and SOCS box containing 6.
    
 0.746
commd8
COMM domain containing 8.
   
  0.719
W5NCJ5_LEPOC
COMM domain containing 4.
    
  0.702
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.694
commd1
Copper metabolism (Murr1) domain containing 1.
    
  0.687
commd9
COMM domain containing 9.
    
  0.682
rnf7
Ring finger protein 7.
    
 0.680
W5MN47_LEPOC
Si:ch211-202c21.7.
    
 0.680
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.