STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cutcCutC copper transporter homolog (E. coli). (215 aa)    
Predicted Functional Partners:
W5MJC8_LEPOC
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
  
  
 0.644
W5LZC5_LEPOC
RAD51 paralog C.
      
 0.589
LOC107078120
PPC domain-containing protein.
      
 0.583
ybey
YbeY metalloendoribonuclease.
      
 0.580
atox1
Antioxidant 1 copper chaperone.
      
 0.577
W5MWG0_LEPOC
ATPase copper transporting beta.
     
 0.567
atp7a
ATPase copper transporting alpha.
     
 0.567
oca2
Oculocutaneous albinism II.
      
 0.550
SLC11A2
Solute carrier family 11 member 2.
      
 0.545
tpi1
Triosephosphate isomerase.
      
 0.539
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.