STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
droshaDrosha ribonuclease III. (1400 aa)    
Predicted Functional Partners:
dgcr8
DGCR8 microprocessor complex subunit.
   
 0.998
ddx5
DEAD (Asp-Glu-Ala-Asp) box helicase 5; Belongs to the DEAD box helicase family.
  
 0.947
W5N1I2_LEPOC
Helicase ATP-binding domain-containing protein.
  
 0.945
mrps9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.943
mrpl27
Mitochondrial ribosomal protein L27.
  
 
 0.940
mrps6
Mitochondrial ribosomal protein S6.
   
 
 0.938
mrpl19
Mitochondrial ribosomal protein L19.
  
 
 0.933
mrpl17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.933
mrps16
Mitochondrial ribosomal protein S16.
  
 
 0.928
W5NB71_LEPOC
MRP-L46 domain-containing protein.
   
 
 0.928
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.