STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mex3bMex-3 RNA binding family member B. (546 aa)    
Predicted Functional Partners:
snupn
Snurportin 1.
    
 
 0.622
W5NBX6_LEPOC
Interleukin-1 receptor-associated kinase 1.
    
 0.577
ift81
Intraflagellar transport 81 homolog.
    
 0.568
srrm4
Serine/arginine repetitive matrix 4.
    
 
 0.567
W5LW97_LEPOC
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.547
W5MFE5_LEPOC
Uncharacterized protein.
   
 0.547
W5MY78_LEPOC
Intraflagellar transport 88 homolog.
   
 0.545
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.542
ift22
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.538
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.533
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.