STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frmpd1FERM and PDZ domain containing 1b. (1510 aa)    
Predicted Functional Partners:
gpsm2
G protein signaling modulator 2, like.
    
 
 0.895
GPSM1
G protein signaling modulator 1b.
    
 
 0.575
W5NN16_LEPOC
Solute carrier family 25 member 51b; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.562
W5NCA1_LEPOC
Germ cell nuclear acidic peptidase.
   
  
 0.559
W5MJF1_LEPOC
Flavin adenine dinucleotide synthetase 1.
      
 0.499
chrna9
Cholinergic receptor, nicotinic, alpha 9.
      
 0.485
W5N5C6_LEPOC
F-box protein 10.
      
 0.433
tmem51
Transmembrane protein 51b.
      
 0.430
LOC102692059
SUB1 regulator of transcription a.
      
 0.429
ric8a
RIC8 guanine nucleotide exchange factor A.
      
 0.420
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.