STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5N5G9_LEPOCTBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1. (1151 aa)    
Predicted Functional Partners:
rab14
RAB14, member RAS oncogene family.
    
 0.854
rab2a
RAB2A, member RAS oncogene family.
    
 0.829
rab11b
RAB11B, member RAS oncogene family, a.
    
 0.658
rab25
RAB11a, member RAS oncogene family, like.
    
 0.658
rab11a
RAB11a, member RAS oncogene family.
    
 0.658
prkaa2
Non-specific serine/threonine protein kinase.
     
 0.647
ttc33
Non-specific serine/threonine protein kinase.
     
 0.647
akt1
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.607
akt2
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.607
W5NE85_LEPOC
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.607
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.