STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5N5L5_LEPOCUncharacterized protein. (910 aa)    
Predicted Functional Partners:
W5NEH8_LEPOC
Nucleoporin 133.
   
 0.983
W5NH37_LEPOC
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.983
W5N7S6_LEPOC
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 0.979
W5NDG4_LEPOC
Nucleoporin 37.
    
 0.978
nup85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.976
W5NK62_LEPOC
Uncharacterized protein.
    
 0.976
seh1l
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
   
 0.973
W5N4Q5_LEPOC
Nucleoporin 155.
   
 0.963
nup93
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
    
 0.958
nup205
Nucleoporin 205.
   
 0.957
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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