STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102691882Peripherin 2-like a. (327 aa)    
Predicted Functional Partners:
LOC102687524
Somatolactin alpha.
   
    0.688
LOC102694171
Growth hormone 1.
   
    0.688
npy2r
Neuropeptide Y receptor Y2; Belongs to the G-protein coupled receptor 1 family.
   
    0.688
LOC102698548
Neuropeptide Y receptor Y7; Belongs to the G-protein coupled receptor 1 family.
   
    0.688
LOC102690117
Opticin.
   
  
 0.597
mst1r
Macrophage stimulating 1 receptor b.
    
  0.593
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.593
rd3
Retinal degeneration 3, GUCY2D regulator.
    
 
 0.463
chad
Chondroadherin.
   
    0.426
LOC102684193
Guanylate cyclase.
   
  
 0.419
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.