STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
map11Microtubule associated protein 1. (599 aa)    
Predicted Functional Partners:
W5N8C6_LEPOC
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
  0.839
trappc5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
  0.815
TRAPPC2B
Trafficking protein particle complex 2B.
    
 0.676
trappc2l
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.671
W5NKE7_LEPOC
Uncharacterized protein.
    
   0.661
trappc12
Trafficking protein particle complex 12.
     
 0.560
trappc4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
     
 0.559
trappc8
Trafficking protein particle complex 8.
     
 0.559
trappc13
Trafficking protein particle complex 13.
     
 0.558
trappc10
Trafficking protein particle complex 10.
     
 0.557
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.