STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM43Uncharacterized protein. (402 aa)    
Predicted Functional Partners:
kbtbd12
Kelch repeat and BTB (POZ) domain containing 12.
      
 0.587
kcng3
Potassium voltage-gated channel, subfamily G, member 3; Belongs to the potassium channel family.
      
 0.575
prr35
Si:ch211-248l17.3.
      
 0.572
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
      
 0.564
ncln
Nicalin; May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning.
      
 0.558
rrp36
Ribosomal RNA processing 36.
      
 0.556
smpd4
Sphingomyelin phosphodiesterase 4.
      
 0.545
LOC102695806
Junction plakoglobin b.
      
 0.544
bahd1
Bromo adjacent homology domain containing 1.
      
 0.527
W5M2M6_LEPOC
STT3 oligosaccharyltransferase complex catalytic subunit B.
      
 0.520
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.