STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5N6G9_LEPOCInterferon phi 2. (193 aa)    
Predicted Functional Partners:
LOC107079272
Interferon phi 1.
  
  
0.944
W5M9H0_LEPOC
Fibronectin type-III domain-containing protein.
    
 0.927
W5NKM8_LEPOC
Interferon regulatory factor 3.
     
 0.883
LOC107079430
Uncharacterized protein.
    
 0.873
W5NEC5_LEPOC
Fibronectin type-III domain-containing protein.
     
 0.869
irf7
Interferon regulatory factor 7.
     
 0.868
W5M9B7_LEPOC
Uncharacterized protein.
   
 0.802
il12rb1
Uncharacterized protein.
     
 0.792
LOC102682152
LIF receptor subunit alpha a.
     
 0.789
LOC107077872
Uncharacterized protein.
   
 
  0.789
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.