STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SECISBP2LSECIS binding protein 2 like. (1079 aa)    
Predicted Functional Partners:
W5NNT2_LEPOC
Sulfite oxidase; Belongs to the cytochrome b5 family.
   
 0.925
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
  
 0.803
W5MS35_LEPOC
Ankyrin repeat domain 45.
  
 0.803
eefsec
Eukaryotic elongation factor, selenocysteine-tRNA-specific.
   
 0.796
rpl30
Ribosomal protein L30.
   
 0.791
ero1a
Endoplasmic reticulum oxidoreductase alpha.
   
 0.779
W5NFS2_LEPOC
Endoplasmic reticulum oxidoreductase beta.
   
 0.779
calr3
Calreticulin.
   
 0.748
LOC102684739
Calreticulin.
   
 0.748
gps1
G protein pathway suppressor 1.
    
 0.736
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (28%) [HD]