STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abhd6Abhydrolase domain containing 6a. (339 aa)    
Predicted Functional Partners:
mgll
Monoglyceride lipase.
    
 0.728
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.683
W5MEE1_LEPOC
PALB2_WD40 domain-containing protein.
   
 0.683
W5MEG4_LEPOC
Uncharacterized protein.
   
 0.683
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.659
aasdh
Aminoadipate-semialdehyde dehydrogenase.
    
 0.650
faah
Fatty acid amide hydrolase.
    
 0.630
faah2
Fatty acid amide hydrolase 2b.
    
 0.630
isoc1
Isochorismatase domain containing 1.
  
 0.614
acads
Acyl-CoA dehydrogenase short chain.
  
 0.611
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.