STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CATSPERBCation channel sperm associated auxiliary subunit beta. (1105 aa)    
Predicted Functional Partners:
W5M5P7_LEPOC
Uncharacterized protein.
  
 
 0.993
W5M075_LEPOC
Ion_trans domain-containing protein.
    
 0.991
CATSPER3
Cation channel sperm associated 3.
    
 0.991
W5NAF3_LEPOC
Uncharacterized protein.
  
 
 0.987
W5NA84_LEPOC
Ion_trans domain-containing protein.
  
 
 0.969
CATSPERE
Catsper channel auxiliary subunit epsilon.
  
 
 0.944
W5ME77_LEPOC
Ion_trans domain-containing protein.
    
 0.871
W5NMJ6_LEPOC
Uncharacterized protein.
    
 0.866
tmem238
Si:dkeyp-72e1.6.
    
 0.866
cacna1h
Calcium channel, voltage-dependent, T type, alpha 1H subunit b.
    
 0.820
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.