STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slmapSarcolemma associated protein a. (867 aa)    
Predicted Functional Partners:
pdcd10
Programmed cell death 10b.
    
 
 0.959
LOC102696336
MOB family member 4, phocein.
    
 
 0.946
W5LZH3_LEPOC
Protein phosphatase 2, regulatory subunit A, beta b.
    
 
 0.931
sike1
Suppressor of IKBKE 1.
    
 
 0.910
fgfr1op2
FGFR1 oncogene partner 2.
    
 
 0.910
ak9
Adenylate kinase 9.
    
  0.890
strip1
Striatin interacting protein 1.
    
 
 0.877
strip2
Striatin interacting protein 2.
    
 
 0.877
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.863
PPP2CA
Serine/threonine-protein phosphatase.
    
 
 0.848
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.