STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5N6W6_LEPOCLIM zinc-binding domain-containing protein. (454 aa)    
Predicted Functional Partners:
haus1
HAUS augmin-like complex, subunit 1.
   
 0.855
haus3
HAUS augmin-like complex, subunit 3.
   
 0.841
W5MEP5_LEPOC
Uncharacterized protein.
    
 0.832
W5MWM5_LEPOC
Receptor-interacting serine-threonine kinase 2.
    
  0.798
rbm42
RNA binding motif protein 42.
   
 0.769
haus5
HAUS augmin-like complex, subunit 5.
   
 0.769
LOC102696607
Adhesion G protein-coupled receptor G1.
    
  0.754
evl
Enah/Vasp-like b.
    
 0.708
W5NBW0_LEPOC
Vasodilator stimulated phosphoprotein a.
    
 0.708
W5NG30_LEPOC
ENAH actin regulator.
    
 0.708
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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