STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gancGlucosidase, alpha; neutral C; Belongs to the glycosyl hydrolase 31 family. (967 aa)    
Predicted Functional Partners:
AMY1C
Alpha-amylase.
  
 
 0.892
LOC102697874
Glucosidase, beta, acid 3 (gene/pseudogene); Belongs to the glycosyl hydrolase 1 family.
  
 0.880
si
Uncharacterized protein.
  
  
 
0.875
gla
Alpha-galactosidase.
     
 0.871
LOC102687955
Hexokinase domain containing 1.
     
 0.861
W5N3E5_LEPOC
Uncharacterized protein.
     
 0.857
gaa
Glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II); Belongs to the glycosyl hydrolase 31 family.
  
  
 
0.813
W5N222_LEPOC
Alpha-galactosidase.
     
 0.806
LOC102688851
Uncharacterized protein.
 
 
 0.793
HK1
Hexokinase 1.
     
 0.791
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.