STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdia4Protein disulfide-isomerase A4; Belongs to the protein disulfide isomerase family. (644 aa)    
Predicted Functional Partners:
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
  
 0.956
W5NIX5_LEPOC
Protein disulfide isomerase family A, member 6.
   
0.940
ero1a
Endoplasmic reticulum oxidoreductase alpha.
   
 0.926
W5NFS2_LEPOC
Endoplasmic reticulum oxidoreductase beta.
   
 0.926
W5NNT2_LEPOC
Sulfite oxidase; Belongs to the cytochrome b5 family.
   
 0.925
calr3
Calreticulin.
   
 0.902
LOC102684739
Calreticulin.
   
 0.902
W5N6P2_LEPOC
Thioredoxin domain containing 5; Belongs to the protein disulfide isomerase family.
   
0.856
W5N925_LEPOC
Protein disulfide-isomerase.
   
0.809
W5MS35_LEPOC
Ankyrin repeat domain 45.
  
 0.803
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.