STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CXCL8-2Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family. (104 aa)    
Predicted Functional Partners:
LOC102692294
Chemokine (C-X-C motif) receptor 1; Belongs to the G-protein coupled receptor 1 family.
   
 0.928
LOC102692498
Chemokine (C-X-C motif) receptor 2; Belongs to the G-protein coupled receptor 1 family.
   
 0.928
cxcl12
Chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.872
LOC107077132
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
  
0.836
cxcr4
Chemokine (C-X-C motif) receptor 4a; Belongs to the G-protein coupled receptor 1 family.
    
 0.833
relb
V-rel avian reticuloendotheliosis viral oncogene homolog B.
    
 0.777
W5NGW5_LEPOC
V-rel avian reticuloendotheliosis viral oncogene homolog.
    
 0.777
agtr1
Angiotensin II receptor, type 1b; Belongs to the G-protein coupled receptor 1 family.
    
 0.769
LOC102684371
SCY domain-containing protein.
  
 
0.764
W5NN65_LEPOC
Chemokine (C-C motif) receptor 7; Belongs to the G-protein coupled receptor 1 family.
    
 0.764
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.