STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cntnap2Contactin associated protein like 2b. (1320 aa)    
Predicted Functional Partners:
cntn2
Contactin 2.
   
 0.911
W5MJ26_LEPOC
Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.
 
      0.802
cntn1
Contactin 1b.
   
 0.613
cntn5
Contactin 5.
   
 0.613
LOC102693751
Contactin 4.
   
 0.613
W5MUH2_LEPOC
Uncharacterized protein.
   
 0.613
LOC102694086
Contactin 3b.
   
 0.613
W5LZ11_LEPOC
Neuronal cell adhesion molecule a.
   
 0.601
chl1
Cell adhesion molecule L1-like b.
   
 0.601
W5N2A4_LEPOC
Neurofascin homolog (chicken) a.
   
 0.601
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.