STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dag1Dystroglycan 1. (874 aa)    
Predicted Functional Partners:
W5M153_LEPOC
Heparan sulfate proteoglycan 2.
   
 0.944
pomgnt2
Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-).
    
 0.938
W5MKE8_LEPOC
NtA domain-containing protein.
   
 0.897
W5MKH4_LEPOC
Agrin.
   
 0.897
LAMC1
Laminin subunit gamma 1.
   
 0.891
LAMB3
Laminin subunit beta 3.
    
 0.883
lamb1
Laminin, beta 1a.
    
 0.879
eogt
EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase.
    
 0.878
lamb2
Laminin, beta 2 (laminin S).
    
 0.875
W5M522_LEPOC
Laminin, alpha 1.
    
 0.870
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.