STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5N7H1_LEPOCGRB10 interacting GYF protein 1b. (1146 aa)    
Predicted Functional Partners:
W5MF44_LEPOC
Eukaryotic translation initiation factor 4E family member 2; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.958
ddx6
DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.
    
 
 0.933
W5M9Z3_LEPOC
DEAD (Asp-Glu-Ala-Asp) box helicase 61.
    
 
 0.933
W5N163_LEPOC
Si:dkey-217f16.6.
    
 
 0.907
tnrc6a
Trinucleotide repeat containing adaptor 6A.
   
 
 0.818
tnrc6c
Trinucleotide repeat containing adaptor 6C1.
   
 
 0.818
W5MFW0_LEPOC
Zinc finger protein 598.
    
 
 0.709
gak
Cyclin G associated kinase.
   
  
 0.581
dis3l
DIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.
   
 
 0.577
cnot1
CCR4-NOT transcription complex, subunit 1.
   
 
 0.575
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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