STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hoxb9Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (249 aa)    
Predicted Functional Partners:
hoxb6
Homeobox B6a.
   
 
0.787
hoxb5
Homeobox B5b.
   
 
0.740
hoxb7
Homeobox B7a.
  
 
0.589
btg2
B-cell translocation gene 2.
    
 
 0.568
hoxb8
Homeobox B8a.
   
 
0.495
hoxb3
Homeobox B3a.
   
 
0.491
hoxd8
Homeobox domain-containing protein.
   
 
0.481
hand2
Heart and neural crest derivatives expressed 2.
    
 
 0.424
LOC102696492
Pre-B-cell leukemia homeobox 2.
    
 
 0.403
pbx3
Homeobox domain-containing protein.
    
 
 0.403
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.