STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2OUbiquitin conjugating enzyme E2 O. (1314 aa)    
Predicted Functional Partners:
TMEM189-UBE2V1
TMEM189-UBE2V1 readthrough.
   
 0.996
W5MNK9_LEPOC
Thyroid hormone receptor interactor 12.
   
 0.914
nap1l1
Nucleosome assembly protein 1-like 1; Belongs to the nucleosome assembly protein (NAP) family.
    
 
 0.900
ube2v2
Ubiquitin-conjugating enzyme E2 variant 2.
   
 0.851
FANCM
FA complementation group M.
    
 0.840
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.820
RANBP2
RAN binding protein 2.
   
 0.811
ube4b
Ubiquitination factor E4B, UFD2 homolog (S. cerevisiae).
   
 0.809
ube4a
Ubiquitination factor E4A (UFD2 homolog, yeast).
   
 0.798
ube2h
Ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.
   
 0.790
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.