STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5N7P1_LEPOCSi:dkey-225f5.4. (299 aa)    
Predicted Functional Partners:
ndc80
NDC80 kinetochore complex component.
   
 
 0.945
W5NLL7_LEPOC
MIS12 kinetochore complex component.
    
 
 0.938
W5MLX8_LEPOC
SPC24 component of NDC80 kinetochore complex.
   
 
 0.932
spc25
SPC25 component of NDC80 kinetochore complex.
   
 
 0.926
BUB1B
BUB1 N-terminal domain-containing protein.
   
 0.887
W5NJ26_LEPOC
Uncharacterized protein.
   
 0.887
W5N9F5_LEPOC
UF2 component of NDC80 kinetochore complex.
   
 
 0.882
W5N9G1_LEPOC
UF2 component of NDC80 kinetochore complex.
   
 
 0.882
LOC102694580
Si:dkey-6i22.5.
    
 
 0.856
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.786
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.