STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tex9Testis expressed 9. (397 aa)    
Predicted Functional Partners:
CCDC112
Coiled-coil domain containing 112.
    
 
 0.699
ccdc60
Coiled-coil domain containing 60.
      
 0.463
W5MNT2_LEPOC
Si:rp71-19m20.1.
      
 0.431
W5LZV8_LEPOC
UTP3 small subunit processome component.
      
 0.429
W5NA59_LEPOC
Radial spoke head component 4A.
   
    0.426
mospd2
Motile sperm domain containing 2.
      
 0.424
faxc
Failed axon connections homolog, metaxin like GST domain containing b.
      
 0.420
CCDC14
Coiled-coil domain containing 14.
    
 
 0.409
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.