STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5N7U6_LEPOCCholinergic receptor, nicotinic, epsilon. (470 aa)    
Predicted Functional Partners:
W5MKA6_LEPOC
Cholinergic receptor, nicotinic, alpha 1 (muscle).
  
0.886
LOC102693289
Si:ch73-380n15.2.
  
0.767
W5NBC6_LEPOC
Cholinergic receptor, nicotinic, alpha 7 (neuronal).
  
0.766
chrna2
Cholinergic receptor, nicotinic, alpha 2a (neuronal).
  
 
 
0.683
chrna4
Cholinergic receptor, nicotinic, alpha 4b.
  
 
 
0.678
W5MIJ9_LEPOC
Si:ch211-39a7.1; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 
0.666
chrnb3
Cholinergic receptor, nicotinic, beta 3b (neuronal).
  
 
0.641
chrna5
Cholinergic receptor, nicotinic, alpha 5.
  
 
0.636
W5MFM6_LEPOC
Receptor-associated protein of the synapse, 43kD.
   
 
 0.536
MUSK
Muscle associated receptor tyrosine kinase.
    
 
 0.454
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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