STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IKZF3IKAROS family zinc finger 3. (524 aa)    
Predicted Functional Partners:
ak9
Adenylate kinase 9.
    
  0.871
crbn
Cereblon.
    
 
 0.731
W5LV61_LEPOC
Damage-specific DNA binding protein 1.
    
 0.619
W5M661_LEPOC
RAD21 cohesin complex component a.
    
 0.532
W5MFP6_LEPOC
RAD21 cohesin complex component like 1.
    
 0.532
ywhae
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1; Belongs to the 14-3-3 family.
    
  0.516
bard1
BRCA1 associated RING domain 1.
    
  0.513
spopl
Speckle type BTB/POZ protein like a.
   
 0.493
LOC102689826
Speckle type BTB/POZ protein.
   
 0.493
YTHDC2
YTH domain containing 2.
    
  0.484
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.