Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC102686089 | podxl2 | ENSLOCP00000002997 | ENSLOCP00000016743 | Amyloid beta precursor protein binding family A member 3. | Podocalyxin like 2. | 0.617 |
NCSTN | podxl2 | ENSLOCP00000002162 | ENSLOCP00000016743 | Nicastrin. | Podocalyxin like 2. | 0.669 |
W5MGE8_LEPOC | podxl2 | ENSLOCP00000007457 | ENSLOCP00000016743 | Sortilin-related receptor, L(DLR class) A repeats containing. | Podocalyxin like 2. | 0.824 |
W5N8C2_LEPOC | podxl2 | ENSLOCP00000016881 | ENSLOCP00000016743 | Amyloid beta (A4) precursor protein-binding, family A, member 2b. | Podocalyxin like 2. | 0.620 |
W5NIC1_LEPOC | podxl2 | ENSLOCP00000020380 | ENSLOCP00000016743 | Tumor necrosis factor receptor superfamily, member 21. | Podocalyxin like 2. | 0.648 |
apba1 | podxl2 | ENSLOCP00000011543 | ENSLOCP00000016743 | Amyloid beta (A4) precursor protein-binding, family A, member 1a. | Podocalyxin like 2. | 0.618 |
nae1 | podxl2 | ENSLOCP00000006048 | ENSLOCP00000016743 | NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-NAE1 E1 enzyme. E1 activates NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-UBA3 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of UBE2M. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily. | Podocalyxin like 2. | 0.765 |
podxl2 | LOC102686089 | ENSLOCP00000016743 | ENSLOCP00000002997 | Podocalyxin like 2. | Amyloid beta precursor protein binding family A member 3. | 0.617 |
podxl2 | NCSTN | ENSLOCP00000016743 | ENSLOCP00000002162 | Podocalyxin like 2. | Nicastrin. | 0.669 |
podxl2 | W5MGE8_LEPOC | ENSLOCP00000016743 | ENSLOCP00000007457 | Podocalyxin like 2. | Sortilin-related receptor, L(DLR class) A repeats containing. | 0.824 |
podxl2 | W5N8C2_LEPOC | ENSLOCP00000016743 | ENSLOCP00000016881 | Podocalyxin like 2. | Amyloid beta (A4) precursor protein-binding, family A, member 2b. | 0.620 |
podxl2 | W5NIC1_LEPOC | ENSLOCP00000016743 | ENSLOCP00000020380 | Podocalyxin like 2. | Tumor necrosis factor receptor superfamily, member 21. | 0.648 |
podxl2 | apba1 | ENSLOCP00000016743 | ENSLOCP00000011543 | Podocalyxin like 2. | Amyloid beta (A4) precursor protein-binding, family A, member 1a. | 0.618 |
podxl2 | nae1 | ENSLOCP00000016743 | ENSLOCP00000006048 | Podocalyxin like 2. | NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-NAE1 E1 enzyme. E1 activates NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-UBA3 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of UBE2M. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily. | 0.765 |
podxl2 | sgtb | ENSLOCP00000016743 | ENSLOCP00000012948 | Podocalyxin like 2. | Small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta. | 0.624 |
podxl2 | tpst1 | ENSLOCP00000016743 | ENSLOCP00000006364 | Podocalyxin like 2. | Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family. | 0.677 |
podxl2 | tpst2 | ENSLOCP00000016743 | ENSLOCP00000010513 | Podocalyxin like 2. | Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family. | 0.677 |
sgtb | podxl2 | ENSLOCP00000012948 | ENSLOCP00000016743 | Small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta. | Podocalyxin like 2. | 0.624 |
tpst1 | podxl2 | ENSLOCP00000006364 | ENSLOCP00000016743 | Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family. | Podocalyxin like 2. | 0.677 |
tpst2 | podxl2 | ENSLOCP00000010513 | ENSLOCP00000016743 | Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family. | Podocalyxin like 2. | 0.677 |