STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5N818_LEPOCUncharacterized protein. (334 aa)    
Predicted Functional Partners:
W5MGN9_LEPOC
PITPNM family member 3.
 
    
 0.835
W5NLD9_LEPOC
Dolichol kinase.
    
 0.671
W5NJH3_LEPOC
Membrane bound O-acyltransferase domain containing 2a; Belongs to the membrane-bound acyltransferase family.
     
 0.559
W5MKX1_LEPOC
CTD nuclear envelope phosphatase 1 regulatory subunit 1.
     
 0.529
LOC102694524
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2.
    
 0.516
LOC102685277
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 3.
    
 0.516
W5MPI5_LEPOC
RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.
    
 0.516
W5MSJ5_LEPOC
Ubiquitin-like domain containing CTD phosphatase 1.
    
 0.516
LOC102693905
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1.
    
 0.516
ctdspl
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like b.
    
 0.516
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.