STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102685189Deoxyribonuclease; Belongs to the DNase I family. (303 aa)    
Predicted Functional Partners:
W5N321_LEPOC
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.942
tbk1
TANK-binding kinase 1.
   
 0.942
tradd
Tnfrsf1a-associated via death domain.
     
 0.876
LOC102682818
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
   
 0.876
W5N737_LEPOC
TBK1 binding protein 1.
     
 0.871
azi2
5-azacytidine induced 2.
     
 0.856
optn
Optineurin.
   
 0.850
smcr8
Smith-Magenis syndrome chromosome region, candidate 8a.
     
 0.792
traf2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.787
LOC102695888
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.787
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.