STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5N841_LEPOCSi:dkey-17e16.9. (684 aa)    
Predicted Functional Partners:
CYP4F8
Cytochrome P450 family 4 subfamily F member 8; Belongs to the cytochrome P450 family.
    
 0.636
PLA2G12B
Phospholipase A2, group XIIB.
    
 0.631
ptgs2
Prostaglandin-endoperoxide synthase 2b.
     
 0.613
PTGS1
Prostaglandin-endoperoxide synthase 1.
     
 0.613
LOC102696699
Cytochrome P450, family 2, subfamily U, polypeptide 1; Belongs to the cytochrome P450 family.
    
  0.611
pla2g12a
Phospholipase A2, group XIIA.
    
  0.609
LOC102688887
Retinoic acid receptor responder 3-like.
    
  0.606
pla2g4a
Phospholipase A2.
   
 
 0.601
LOC102696701
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 
  0.587
gpx3
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 
  0.587
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.