STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASB5Ankyrin repeat and SOCS box containing 5. (303 aa)    
Predicted Functional Partners:
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.834
W5NA12_LEPOC
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta.
  
 
  0.758
cul5
Cullin 5b; Belongs to the cullin family.
    
 0.753
asb6
Ankyrin repeat and SOCS box containing 6.
  
 
 0.699
commd8
COMM domain containing 8.
   
  0.643
commd1
Copper metabolism (Murr1) domain containing 1.
    
  0.639
W5NCJ5_LEPOC
COMM domain containing 4.
    
  0.602
commd9
COMM domain containing 9.
    
  0.595
asb7
Ankyrin repeat and SOCS box containing 7.
  
 
0.594
LOC102689118
COMM domain containing 5.
    
  0.585
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.