STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtmr10Myotubularin related protein 10. (773 aa)    
Predicted Functional Partners:
mtmr2
Myotubularin related protein 2.
   
0.707
mtm1
Myotubularin 1.
   
0.687
mtmr1
Myotubularin related protein 1b.
   
0.687
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
   0.649
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.590
W5M8B5_LEPOC
Phosphoinositide kinase, FYVE finger containing.
     
 0.554
pi4ka
Phosphatidylinositol 4-kinase, catalytic, alpha b; Belongs to the PI3/PI4-kinase family.
     
 0.521
W5MCV8_LEPOC
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.519
sacm1l
SAC1 like phosphatidylinositide phosphatase a.
     
 0.506
pcsk9
Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family.
     
 0.506
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.