STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acsl1Acyl-CoA synthetase long chain family member 1b. (699 aa)    
Predicted Functional Partners:
acsl4
Acyl-CoA synthetase long chain family member 4a.
  
0.909
acsl3
Acyl-CoA synthetase long chain family member 3b.
  
0.907
acsbg2
Acyl-CoA synthetase bubblegum family member 2.
  
 
 
0.882
LOC102684444
AMP-binding domain-containing protein.
  
 
 
0.882
fasn
Coiled-coil domain containing 57.
   
 0.876
W5NC94_LEPOC
Acyl-CoA synthetase bubblegum family member 1.
  
 
 
0.874
cpt1b
Carnitine palmitoyltransferase 1B (muscle); Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.874
ppt1
Palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile).
     
 0.871
W5MPZ5_LEPOC
Palmitoyl-protein thioesterase 2.
     
 0.871
W5M0Y9_LEPOC
Carnitine palmitoyltransferase 1Aa (liver); Belongs to the carnitine/choline acetyltransferase family.
     
 0.870
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.