STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSR1Macrophage scavenger receptor 1. (425 aa)    
Predicted Functional Partners:
W5MF23_LEPOC
Complement component 1, q subcomponent, C chain.
  
  0.537
W5MSG0_LEPOC
V-set_CD47 domain-containing protein.
   
 0.499
LOC102696687
Uncharacterized protein.
   
 
 0.485
ptk7
Protein tyrosine kinase 7a; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.479
apob
Apolipoprotein Bb, tandem duplicate 1.
     
 0.476
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
  0.468
calr3
Calreticulin.
   
 0.450
LOC102684739
Calreticulin.
   
 0.450
W5NJ85_LEPOC
Hexose-binding lectin 4.
  
 
  0.434
colec11
Collectin sub-family member 11.
  
 
  0.409
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.