STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5N9N0_LEPOCUncharacterized protein. (567 aa)    
Predicted Functional Partners:
ruvbl1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.850
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.848
W5NIU6_LEPOC
Exonuclease 1.
   
 0.844
W5MSH6_LEPOC
Chromo domain-containing protein.
 
  
   0.835
ACTR5
Actin related protein 5; Belongs to the actin family.
    
 0.822
FANCM
FA complementation group M.
   
 0.816
rad18
RAD18 E3 ubiquitin protein ligase.
   
 0.803
W5LZ79_LEPOC
Actin-like 6A; Belongs to the actin family.
   
 0.773
actl6b
Actin-like 6B; Belongs to the actin family.
   
 0.773
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.772
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.