STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acanAggrecan b. (1313 aa)    
Predicted Functional Partners:
tnr
Tenascin R (restrictin, janusin).
   
 0.975
W5LZU4_LEPOC
Tenascin C.
   
 0.939
hapln1
Hyaluronan and proteoglycan link protein 1b.
   
0.900
fmod
Fibromodulin b.
     
 0.847
lum
Lumican.
    
 0.813
LOC102686718
Ig-like domain-containing protein.
    
 
 0.794
LOC107076178
Si:zfos-2070c2.3.
    
 
 0.794
ADAMTS5
ADAM metallopeptidase with thrombospondin type 1 motif 5.
     
 0.764
VCAN
Versican.
    
0.757
TNN
Tenascin N.
   
  0.739
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.