STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102687476Serine and arginine rich splicing factor 7a. (183 aa)    
Predicted Functional Partners:
srsf1
Serine and arginine rich splicing factor 1b.
   
0.985
srsf3
Serine and arginine rich splicing factor 3a.
  
0.977
srsf2
Serine and arginine rich splicing factor 2a.
   
0.965
srsf9
Serine and arginine rich splicing factor 9.
   
0.926
tra2b
RRM domain-containing protein.
   
 0.921
tra2a
Transformer 2 alpha homolog.
   
 0.921
SRSF10
Serine and arginine rich splicing factor 10.
   
0.901
rbm8a
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.868
W5LZ72_LEPOC
Zgc:153681.
   
 0.855
hnrnpk
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.833
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.