STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102697293Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (639 aa)    
Predicted Functional Partners:
LOC102690357
Amino acid transporter.
    
 0.489
slc1a3
Amino acid transporter.
    
 0.489
LOC102684566
Amino acid transporter.
    
 0.478
slc1a7
Amino acid transporter.
    
 0.478
LOC102687626
Amino acid transporter.
    
 0.478
LOC102691675
Amino acid transporter.
    
 0.478
slc6a2
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
  
  
 
0.475
slc6a3
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
  
  
 
0.475
slc1a2
Amino acid transporter.
    
 0.455
W5MIV5_LEPOC
Amino acid transporter.
    
 0.455
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.