STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mef2aMyocyte enhancer factor 2aa. (521 aa)    
Predicted Functional Partners:
W5MNE8_LEPOC
Myocyte enhancer factor 2d.
  
0.914
mef2b
Myocyte enhancer factor 2b.
    
0.913
nkx2-5
NK2 homeobox 5.
    
 
 0.884
LOC102695970
Mitogen-activated protein kinase.
    
 0.819
LOC102698741
Mitogen-activated protein kinase.
    
 0.819
LOC102685390
Mitogen-activated protein kinase.
    
 0.819
W5NEL3_LEPOC
Mitogen-activated protein kinase 12b.
    
 0.819
W5N0P4_LEPOC
E1A binding protein p300 a.
    
 
 0.816
nfatc1
Nuclear factor of activated T cells 1.
   
 0.809
nfatc2
Nuclear factor of activated T cells 2a.
   
  0.802
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.