STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
foxp3Forkhead box P3b. (459 aa)    
Predicted Functional Partners:
cbfb
Core-binding factor subunit beta.
    
 0.637
runx3
Runt-related transcription factor.
    
 0.585
runx1
Runt-related transcription factor.
    
 0.585
runx2
RUNX family transcription factor 2a.
    
 0.585
LOC102695885
RAR-related orphan receptor C a.
    
 0.580
rorb
RAR-related orphan receptor B.
    
 0.540
rora
RAR-related orphan receptor A, paralog a.
    
 0.540
il10
Interleukin 10.
   
  
 0.520
wdr13
WD repeat domain 13.
      
 0.514
W5MIR5_LEPOC
Pre-B-cell leukemia transcription factor 4.
     
 0.417
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.