STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NAV7_LEPOCSema domain-containing protein; Belongs to the semaphorin family. (260 aa)    
Predicted Functional Partners:
mst1r
Macrophage stimulating 1 receptor b.
    
 0.723
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.723
W5NAW0_LEPOC
Sema domain-containing protein; Belongs to the semaphorin family.
 
     0.651
nrp1
Neuropilin; Belongs to the neuropilin family.
    
 0.537
plxna2
Plexin A2.
    
 0.492
plxna1
Plexin A1a.
    
 0.492
PLXNA3
Plexin A3.
    
 0.492
plxna4
Plexin A4.
    
 0.492
PLXND1
Plexin D1.
    
 0.491
plxnc1
Plexin C1.
    
 0.491
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.