STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102694154Rho GTPase activating protein 36. (671 aa)    
Predicted Functional Partners:
W5MK63_LEPOC
Uncharacterized protein.
 
      0.841
rnd3
Rho family GTPase 3b.
    
 0.742
rhof
Ras homolog family member F.
    
 0.742
rnd1
Rho family GTPase 1a.
    
 0.742
rhoc
Ras homolog family member Cb.
    
 0.742
LOC102682211
Ras homolog gene family, member Ab.
    
 0.742
W5NAW2_LEPOC
Ras homolog gene family, member Ab.
    
 0.742
rhob
Uncharacterized protein.
    
 0.742
W5ML42_LEPOC
Abnormal spindle microtubule assembly.
   
   0.734
kif11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.698
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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