STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC49Leucine rich repeat containing 49. (817 aa)    
Predicted Functional Partners:
ttll1
Tubulin tyrosine ligase-like family, member 1.
    
 0.921
nicn1
Nicolin 1.
   
 0.885
W5MBM8_LEPOC
Tubulin polyglutamylase complex subunit 2.
    
 0.883
W5LVB9_LEPOC
SUEL-type lectin domain-containing protein.
    
   0.766
W5LVS3_LEPOC
SUEL-type lectin domain-containing protein.
    
   0.766
adgrl2
Adhesion G protein-coupled receptor L2a; Belongs to the G-protein coupled receptor 2 family.
    
   0.766
adgrl1
Adhesion G protein-coupled receptor L1a; Belongs to the G-protein coupled receptor 2 family.
    
   0.766
W5N6Q3_LEPOC
Adhesion G protein-coupled receptor L3.1; Belongs to the G-protein coupled receptor 2 family.
    
   0.766
PPP1CC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.753
W5NII6_LEPOC
Tubulin tyrosine ligase.
    
 0.727
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.