STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NBL9_LEPOCCLK4-associating serine/arginine rich protein. (666 aa)    
Predicted Functional Partners:
gphn
Gephyrin b.
 
      0.729
W5MWF9_LEPOC
GRIP domain-containing protein.
      
 0.559
mrpl51
Mitochondrial ribosomal protein L51.
      
 0.536
W5N014_LEPOC
Si:ch211-204c21.1.
    
 
 0.437
ccnl1
Cyclin L1a; Belongs to the cyclin family.
   
  
 0.433
W5MM01_LEPOC
Uncharacterized protein; Belongs to the cyclin family.
   
  
 0.433
W5MA75_LEPOC
Small nuclear RNA activating complex, polypeptide 4.
   
    0.418
rfc5
Replication factor C (activator 1) 5.
   
 
 0.409
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.