STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NBM2_LEPOCUncharacterized protein. (426 aa)    
Predicted Functional Partners:
skp2
S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.
    
 0.886
fbxo4
F-box protein 4.
    
 0.874
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.831
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
  
 
0.768
W5MTY5_LEPOC
F-box and WD repeat domain containing 11.
  
 
0.767
LOC102690644
Si:ch211-154o6.3.
  
  
 
0.750
rnf7
Ring finger protein 7.
    
 0.749
W5MN47_LEPOC
Si:ch211-202c21.7.
    
 0.749
mrpl2
Mitochondrial ribosomal protein L2.
    
 0.748
W5MTZ4_LEPOC
F-box and WD repeat domain containing 11.
   
  0.736
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.