STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NBM5_LEPOCIQ motif and Sec7 domain 2b. (1233 aa)    
Predicted Functional Partners:
LOC102692357
Cytohesin 4a.
    
0.650
cyth3
Cytohesin 1a.
    
0.648
cyth1
Cytohesin 1b.
    
0.648
arf6
ADP-ribosylation factor 6b; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.544
W5MY35_LEPOC
Pleckstrin and Sec7 domain containing 3, like.
     
0.513
W5N3R8_LEPOC
Pleckstrin and Sec7 domain containing a.
     
0.513
psd2
Pleckstrin and Sec7 domain containing 2.
     
0.513
W5NDS5_LEPOC
Uncharacterized protein.
     
0.513
W5MJ94_LEPOC
ADP-ribosylation factor-like 15b.
    
 
 0.436
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.